NSX-T 2.4.0 introduced support for IPv6.
This code change involved new handling of interfaces with link local addresses.
IPv4 link local subnet is 169.254.0.0/16.
Any transit subnet interface in the range 169.254.0.0/16 will be removed and not readded preventing communication between the T0 and T1 routers.
This issue is not present in earlier releases and can impact upgraded or newly installed environments.